Player Sidebar Customization

Is there a way to adjust the dimensions of the area where the logo is on the sidebar? I'd like to carry over the design that will appear on each slide to the sidebar area, but the logo space begins and ends up higher than the design is on the slide. I need the top of the navigation/notes/search tabs to begin lower on the pane and the logo to begin lower on the pane. (Clear as mud, right?)

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