Javascript changing alignment and font


I have put some javascript in my Storyline template. I published to HTML5 with a Flash Fall back. When I play the "course" in IE, it uses the Flash version.

My first slide executes the javascript when they click a button.

The font on my input box has changed. (The input boxes where I do not have javascript running has not changed)

The other slides show the input, but it's not aligned how it should be. It appears to move down the page.

When I view it in FireFox, the formatting on these slides are fine.

Does anyone know why this is happening and how I can fix it?

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