Animations stopped working after file upgrade in Presenter 13

I opened a PowerPoint (13) file I had originally created in in PowerPoint 10 with presenter 09.

I am running Presenter 13.

I added a new slide with some animations.

When I hit publish it says my presentation was made in an earlier version of presenter and that I need to update it.

I upgrade the presentation but when the presentation runs only the new slide's animations run. All the original slides appear for 2 seconds then advance to the next slide, no animations run.

Any help is much appreciated.

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